PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019194429.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 535aa MW: 59843.8 Da PI: 4.3854

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019194429.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.7	1.1e-53	10	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yL+++v +k+l++ ++i+e+diykvePwdLp +++k+++ ewyfFs dkky +g+r+nrat++gyWk+tgkd++v XP_019194429.1 10 LAPGFRFHPTDEELVFYYLRRRVCAKPLRF-DAISEIDIYKVEPWDLPglSRLKTRDLEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRAVN 103 579***********************99.99***********6448888999********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vg+kktLv+++grapkg++t+Wvmheyrl XP_019194429.1 104 H-RSKVVGMKKTLVYHSGRAPKGQRTNWVMHEYRL 137 9.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 535 aa Download sequence
MESRGSSQLL APGFRFHPTD EELVFYYLRR RVCAKPLRFD AISEIDIYKV EPWDLPGLSR 60 LKTRDLEWYF FSMLDKKYGN GSRTNRATEK GYWKTTGKDR AVNHRSKVVG MKKTLVYHSG 120 RAPKGQRTNW VMHEYRLVDE DLSKAGIVQD AFVLCRVFQK SGSGPKNGEQ YGAPFVEEEW 180 EDDVLAMVPK ADLPDEAELA DDIFLDGDDL EEILGADIPS DGALVPVNNS TGYIEDAAAH 240 VEDFENILVD NVEYPCGQQH PDELKPFDQP IHDFDPKPVK REYMGESSNS MTSESLNCLL 300 NEPLMDTTDR FQFNDGTFLE TNDLSNPVEG NTSGFDMFDF LNFYDAKDDF QDMLFDSDIF 360 IGNDEFLGEQ SPSADKDACD TTEQAVLPNE KAVDTEHKND IASSSKPEPT KLGSDFQHPF 420 IKQASQMLGN IPAPPAFASE IPKDAALRLN AATQASSSVH VTAGLIQISD LTLGSKHGNY 480 NIILSFDFSQ GAQSPGSLEP VSHGKMLSGG WFYFLLFWVL ILSISVKVGT FIYAR

Sequence ? help Back to Top

Protein Sequence Length: 535 aa Download sequence

MESRGSSQLL APGFRFHPTD EELVFYYLRR RVCAKPLRFD AISEIDIYKV EPWDLPGLSR  60
LKTRDLEWYF FSMLDKKYGN GSRTNRATEK GYWKTTGKDR AVNHRSKVVG MKKTLVYHSG  120
RAPKGQRTNW VMHEYRLVDE DLSKAGIVQD AFVLCRVFQK SGSGPKNGEQ YGAPFVEEEW  180
EDDVLAMVPK ADLPDEAELA DDIFLDGDDL EEILGADIPS DGALVPVNNS TGYIEDAAAH  240
VEDFENILVD NVEYPCGQQH PDELKPFDQP IHDFDPKPVK REYMGESSNS MTSESLNCLL  300
NEPLMDTTDR FQFNDGTFLE TNDLSNPVEG NTSGFDMFDF LNFYDAKDDF QDMLFDSDIF  360
IGNDEFLGEQ SPSADKDACD TTEQAVLPNE KAVDTEHKND IASSSKPEPT KLGSDFQHPF  420
IKQASQMLGN IPAPPAFASE IPKDAALRLN AATQASSSVH VTAGLIQISD LTLGSKHGNY  480
NIILSFDFSQ GAQSPGSLEP VSHGKMLSGG WFYFLLFWVL ILSISVKVGT FIYAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-148	NAC family protein