PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019194428.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 400aa MW: 44686.2 Da PI: 5.1371

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019194428.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.4	2e-51	33	160	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yL++++ gk++++ ++++e+d+yk+ePw+L +++k+++ ewyfFs+ d+ky +g+r nrat +gyWkatgkd++v XP_019194428.1 33 LAPGFRFHPTDEELVRYYLRRRACGKSFRF-QAVSEIDVYKSEPWELAgySHLKTRDLEWYFFSPVDRKYGNGSRLNRATGKGYWKATGKDRPVR 126 579***********************99.88**********85347777888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + k+++vg+kktLvf+ grap+g++t+Wvmheyrl XP_019194428.1 127 H-KSQTVGMKKTLVFHCGRAPDGKRTNWVMHEYRL 160 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MMEQQPAQEG GALVVAPPAP APPKRTLAPP TSLAPGFRFH PTDEELVRYY LRRRACGKSF 60 RFQAVSEIDV YKSEPWELAG YSHLKTRDLE WYFFSPVDRK YGNGSRLNRA TGKGYWKATG 120 KDRPVRHKSQ TVGMKKTLVF HCGRAPDGKR TNWVMHEYRL TDNELVEAGV TQDAFVLCRI 180 FQKSALGPPN GDRYAPFVEE EWDDDTALVV PGGVAEDDVG NGDDARVDGN DLDQGALCKA 240 PESPVEPLSL SFVCKRERSE DPEPLSLAQS KRSKQDCPSS SHANGSEDST TTSQDPPTMM 300 MTTNDSPVLL EFPLLDPIEP RENQPSNAPT FDSSTLEKSV PPGYLKFISN LENEILNVSM 360 ERETLKIEVM RAQAMINILQ SRIDLLNKEN EDLRRVVRGG

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MMEQQPAQEG GALVVAPPAP APPKRTLAPP TSLAPGFRFH PTDEELVRYY LRRRACGKSF  60
RFQAVSEIDV YKSEPWELAG YSHLKTRDLE WYFFSPVDRK YGNGSRLNRA TGKGYWKATG  120
KDRPVRHKSQ TVGMKKTLVF HCGRAPDGKR TNWVMHEYRL TDNELVEAGV TQDAFVLCRI  180
FQKSALGPPN GDRYAPFVEE EWDDDTALVV PGGVAEDDVG NGDDARVDGN DLDQGALCKA  240
PESPVEPLSL SFVCKRERSE DPEPLSLAQS KRSKQDCPSS SHANGSEDST TTSQDPPTMM  300
MTTNDSPVLL EFPLLDPIEP RENQPSNAPT FDSSTLEKSV PPGYLKFISN LENEILNVSM  360
ERETLKIEVM RAQAMINILQ SRIDLLNKEN EDLRRVVRGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	1e-108	NAC family protein