PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019193824.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 210aa MW: 24537.6 Da PI: 8.1618 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 52.7 | 1.4e-16 | 8 | 142 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevl 93 p G+ F+Ptd el+ yL+ v+g+++ + i e d+y+ ePw++ + ++++k +y F++ ++++++++r r++ +g+Wka+ + k+++ XP_019193824.1 8 PDGYIFRPTDAELL-GYLALFVTGNPVLSTVPIMESDLYNGeEPWKIFQ--RSRDKVLYIFATLKRRSSSDSRYIRTVGdgKGTWKAQDRGKPIY 99 78************.9**********777455*****998659****63..4678999******************87656899*********** PP NAM 94 sk...........kgelvglkktLvfykgrapkgektdWvmheyr 127 + +++l+g k++L + k ++ + + +m+ey XP_019193824.1 100 RYddddddddnqqSRQLIGYKRSLRYEKSGSK--HDRRFLMKEYY 142 98778777765554555********9854443..47889999996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MERQEHIPDG YIFRPTDAEL LGYLALFVTG NPVLSTVPIM ESDLYNGEEP WKIFQRSRDK 60 VLYIFATLKR RSSSDSRYIR TVGDGKGTWK AQDRGKPIYR YDDDDDDDDN QQSRQLIGYK 120 RSLRYEKSGS KHDRRFLMKE YYFPSNIRAT LKRPLNDIVL CRIKRKQNNR EIMGFESESI 180 EARDIGDIIG ELATKSCSYS EVNSLLETSH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 2e-11 | NAC family protein |