PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019193389.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 255aa MW: 28340.8 Da PI: 6.395 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 125.9 | 3.3e-39 | 4 | 136 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lp GfrF Pt+eelv++yL++k++g + +++ vi+ v+iy++ P +Lp ++++++w++F++ +++ a+g ++nr t++gyWkatg+ XP_019193389.1 4 LPLGFRFYPTEEELVSFYLRRKLQGATsADIDLVIPVVNIYHHTPCHLPLvageLSRGDSEQWFYFIPGEENRARGGKPNRLTRDGYWKATGSPS 98 699**********************995556556***************435633334666********************************** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s+ +e +g k+t+vf++grap g++t+W m+ey++ XP_019193389.1 99 FVYSSMNEIIGEKRTMVFHTGRAPGGTRTQWKMNEYKA 136 ************************************85 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 255 aa Download sequence |
MENLPLGFRF YPTEEELVSF YLRRKLQGAT SADIDLVIPV VNIYHHTPCH LPLVAGELSR 60 GDSEQWFYFI PGEENRARGG KPNRLTRDGY WKATGSPSFV YSSMNEIIGE KRTMVFHTGR 120 APGGTRTQWK MNEYKAAAQV VGGEGGASAS SDAIADLKLC HEFSLCRLYK KSKCDRSFDR 180 RPPADMAATG AGGGAPPPPP PQHNHLPAAA LMERSSSSST TDDYATPPSA MEYQYYWDTC 240 APLWDWEDLN INNLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G22380.1 | 8e-62 | NAC family protein |