PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019193034.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family GATA
Protein Properties Length: 341aa    MW: 37125.9 Da    PI: 6.5743
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019193034.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA529.5e-17238272135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  XP_019193034.1 238 CLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL 272
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MEAREFVIGG GFLGAAAGES QYGCENRYLV EHKSAEHSLN ANNFTVDELL DFSKHDEVTA  60
DDFFDDSAAG RSSTVAAVDS CKSGGQFSGN FSCGSFTDTP FSTSELCIPY DDLAELEWLS  120
NFVEDSFSSD EVQNLQLILA TKTSATAADS SSSASASANC KEIGNNYSLP AFPNSDVSVP  180
GKARSKRSRA APWDWSSRIL LLSPEKSQSE SKNNASAPKA SAASKRRESC NETQGRKCLH  240
CASEKTPQWR TGPMGPKTLC NACGVRYKSG RLVPEYRPAA SPTFVSTKHS NSHRKVLELR  300
RQNDLHLHHQ QQLLSQASIF GGDAYLLHRQ QSCGPDYTHM I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.16e-69GATA family protein