PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019193017.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 314aa    MW: 36032.7 Da    PI: 8.9654
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019193017.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.23.9e-50241532128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                      pGfrFhPtdeelv +yL+++ve+k++++ e ik+vdiyk++PwdLp   ++ ++kewyfF+ r +ky+++ r+nr+t sg+Wkatg dk+v+s+
  XP_019193017.1  24 LPGFRFHPTDEELVGFYLRRRVENKRISI-ELIKQVDIYKHDPWDLPkIGTHVGDKEWYFFCIRGRKYRNSVRPNRVTGSGFWKATGIDKPVYST 117
                     69***************************.89***************44666799***************************************9 PP

             NAM  96 kgel...vglkktLvfykgrapkgektdWvmheyrl 128
                      ge+   +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  XP_019193017.1 118 AGEThlcIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 153
                     6655667***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MDAKKMAVAA AAAVEKDEDE EVILPGFRFH PTDEELVGFY LRRRVENKRI SIELIKQVDI  60
YKHDPWDLPK IGTHVGDKEW YFFCIRGRKY RNSVRPNRVT GSGFWKATGI DKPVYSTAGE  120
THLCIGLKKS LVYYRGSAGK GTKTDWMMHE FRLPPRPADK NNNICQEAEV WTLCRIFKRT  180
TNYKRCMPDW RQQTSRQSTI VDNNNASSKT CGFDSKNVVN LKDMSIMQVT KNEAAMAAAS  240
AQKEQRNQFY VANDQISMAL SSYSSSSTNT TTFWNSPKLL DNHHFFIGEN PHWDELKSVV  300
DLATDPQSFC YSHT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.14e-92NAC family protein