PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019192938.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 380aa    MW: 42465 Da    PI: 5.0395
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019192938.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.2e-19178228256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  XP_019192938.1 178 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAYKLRGE 228
                     59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
MAATKDRGKS KKAMEEEADW ERDEGREFER QQWRPVLEEA SMSDRPLKKI RSPDHQSSSS  60
MACPPPPPSS SSSSYSNSGP VFPFAFDGTQ QSMESLRQLG SVPLLQPQYQ QQMISFSPQQ  120
QQSFGYPPYF AGNLAPSQQQ QQLMQYWNDS LNLSPRGRML MSRFGHRPPV QPLNTTKLYR  180
GVRQRHWGKW VAEIRLPRNR TRLWLGTFDT AEDAAMAYDR EAYKLRGENA RLNFPQLFLG  240
KDRGGGGGAS TAPSSASSSP TTPSKRLASS LSSKVQCEED DVKKLAATQE EESSEVTGSD  300
EVQENVESAS SELVWNEMAE AWLNAMPAGW GPTSPVWDDL DATNSLMLPS NLPFSDPDQQ  360
NHATSPSSCP MRPFFPNDQD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.15e-54ERF family protein