PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019192311.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 299aa    MW: 34058.7 Da    PI: 6.7785
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019192311.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.65.2e-1418971399
                    TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                    + rl lp    ++     e++++ +l +++  sWev+    +++g+  +tkGW eFv ++g+++ D ++F+++g+ +f  +vkvf +
  XP_019192311.1 18 QTRLELPPIISKKLV---EQEVEQVLLTSQEGSWEVET--HRSGGKLCFTKGWDEFVLQHGICVEDLLLFEHTGDLSF--KVKVFGN 97
                    456666666655553...34567788999999******..*******************************9887777..8999865 PP
2B334.43.8e-112102821588
                     -EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3  15 rlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrs 88 
                      + +p +f+ ++g+   ++  + l+   s ++ ++k+  ++++++  +++++GW+eF   n+Lk+g++++Fkl +++
  XP_019192311.1 210 YMHIPANFCLANGLY--CNARICLKGpCSEQEVSLKV--CRGGRTiyTIISRGWSEFIAGNDLKVGEICTFKLRSTE 282
                     589*********998..7889*****44558888888..77777777999**********************87643 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MGEKFPLFFR FMAIHGSQTR LELPPIISKK LVEQEVEQVL LTSQEGSWEV ETHRSGGKLC  60
FTKGWDEFVL QHGICVEDLL LFEHTGDLSF KVKVFGNTSC ERDFKRGRTQ GNEDSVKLKV  120
DIDEVPSPVE IQKHDHAEDS EDSVEFEVDL DEVEVDMDEV PSPVKIQKHD HAKKVTRRKR  180
NPKVVNMSST DRSQFVRSIK QYNIRRRSPY MHIPANFCLA NGLYCNARIC LKGPCSEQEV  240
SLKVCRGGRT IYTIISRGWS EFIAGNDLKV GEICTFKLRS TEGSSNGVVF DVDVLRKST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G32460.12e-08B3 family protein