PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191786.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 293aa    MW: 33035.9 Da    PI: 6.6511
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191786.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH352.6e-11117167153
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53 
                     +r++h  +Er+RR+++ + ++ Lr  lP       ++K s ++ + +Av+YI +
  XP_019191786.1 117 KRVMHRDIERQRRQEMANLYASLRVQLPLeY---LKGKRSTSDHVMEAVNYIED 167
                     79***************************77...9*****************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MRMDKFPHHN PFFPSQQNNE DYSELFSAPH KTHDDDAPFL FQTDPTLLQH QDLQFDVGYL  60
ELDDPVAAAL EVSNYPIPDN VNVNAPRNKG KNKNKQQKPS AAGRGQGESS ASDGKHKRVM  120
HRDIERQRRQ EMANLYASLR VQLPLEYLKG KRSTSDHVME AVNYIEDKQK SIRELEEKRD  180
RLKRVGPSGS DVVDEDYNRR TGNSSSAAAA AMVTVEACLD GVEIFINSGF PNQGFRISRA  240
LDLLVQQGHH VLSCVCSRVD DRLLHTIRVQ VSPQAGVDLQ VLQQHLSDSI NLL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117129KRVMHRDIERQRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.17e-32bHLH family protein