PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019191752.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

ARR-B

Protein Properties

Length: 630aa MW: 68398.7 Da PI: 5.7179

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019191752.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	76.4	3.8e-24	180	233	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++l+Wt LH +F++a++ + G ++A+Pk+ile+m+v+g+t+ehv+SHLQkYR+ XP_019191752.1 180 KKKLVWTARLHYKFLDAITLI-GLNNAVPKKILEVMDVPGITREHVASHLQKYRM 233 689**************99.******************************7 PP
2	Myb_DNA-binding	29.8	1.3e-09	182	232	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 ++ WT+ ++ +++da+++ G + +k+I + m g t++++ s++qky+ XP_019191752.1 182 KLVWTARLHYKFLDAITLIGLNnaVPKKILEVMDvPGITREHVASHLQKYR 232 679*****************9*************************7 PP
3	Response_reg	71.3	3.9e-24	11	121	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH..HHHH....ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealell..kekd....pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalea 89 +l+vdD+ + + +++ +l+k ++ +v +++d++eal +l + +D+++ D+ mp+m+G+el +i+++ +lp+i+++ + ++++ + XP_019191752.1 11 ILVVDDDSTSLAVVAALLRKLNF-QVVTVKDPREALIILggV--EaaggFDVVIADVHMPEMNGFELQHQITTHF-QLPVILMSVDDRDTMVGRG 101 89*******************.9999*****99641..33567**********************.*************** PP HHTTESEEEESS--HHHHHH CS Response_reg 90 lkaGakdflsKpfdpeelvk 109 ++ Ga f+sKp++ ++++k XP_019191752.1 102 VDFGATLFISKPVSVNDVRK 121 ***********9999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 630 aa Download sequence
MDSSAANAMK ILVVDDDSTS LAVVAALLRK LNFQVVTVKD PREALIILGG VEAAGGFDVV 60 IADVHMPEMN GFELQHQITT HFQLPVILMS VDDRDTMVGR GVDFGATLFI SKPVSVNDVR 120 KYLCQIAAAA PKKDDQNTNI IPPLPPTDDP AANTNNNNNN NYEITREGEV TFKTNKLTGK 180 KKLVWTARLH YKFLDAITLI GLNNAVPKKI LEVMDVPGIT REHVASHLQK YRMFLKRVTE 240 LTVPSQRNNV DWGFGSGVNL GPRIAAPRRY GGMLSLINNL QTSLGGGGRW NNNITAEEQP 300 PIPMPPAGTF SSSSSSSFLF SGPPRLAAAS PLCNQPSWRP GYGTGGRQSS LLLSPHHHQQ 360 QQRFNFGLQS SPSLIPARTN MVNPIYQRSF TLLPPLVIRG NINDAIAAAS PPVPALQFQG 420 GGGSSMLQPP QTYNNINNNN AAAETTRYRN IEIMVRGAAA AATRPNQLSG RVVEEVPPNP 480 LDFGFLFDIN DDDVFKFLLS DSTENQSDDA SQNSRPNTCT EGGGNRPPPL FVPVDHDPTV 540 QPQTDLTPPP SHPLHDDAIG TNTATGGDEN SNLSNSSAVT TTQYYDDHED LPSLDQLLLE 600 PRNDEELFLQ SVYASMPSVG AAQQHHTSNN

Sequence ? help Back to Top

Protein Sequence Length: 630 aa Download sequence

MDSSAANAMK ILVVDDDSTS LAVVAALLRK LNFQVVTVKD PREALIILGG VEAAGGFDVV  60
IADVHMPEMN GFELQHQITT HFQLPVILMS VDDRDTMVGR GVDFGATLFI SKPVSVNDVR  120
KYLCQIAAAA PKKDDQNTNI IPPLPPTDDP AANTNNNNNN NYEITREGEV TFKTNKLTGK  180
KKLVWTARLH YKFLDAITLI GLNNAVPKKI LEVMDVPGIT REHVASHLQK YRMFLKRVTE  240
LTVPSQRNNV DWGFGSGVNL GPRIAAPRRY GGMLSLINNL QTSLGGGGRW NNNITAEEQP  300
PIPMPPAGTF SSSSSSSFLF SGPPRLAAAS PLCNQPSWRP GYGTGGRQSS LLLSPHHHQQ  360
QQRFNFGLQS SPSLIPARTN MVNPIYQRSF TLLPPLVIRG NINDAIAAAS PPVPALQFQG  420
GGGSSMLQPP QTYNNINNNN AAAETTRYRN IEIMVRGAAA AATRPNQLSG RVVEEVPPNP  480
LDFGFLFDIN DDDVFKFLLS DSTENQSDDA SQNSRPNTCT EGGGNRPPPL FVPVDHDPTV  540
QPQTDLTPPP SHPLHDDAIG TNTATGGDEN SNLSNSSAVT TTQYYDDHED LPSLDQLLLE  600
PRNDEELFLQ SVYASMPSVG AAQQHHTSNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01760.1	4e-40	ARR-B family protein