PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191574.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family GATA
Protein Properties Length: 377aa    MW: 41387.1 Da    PI: 9.8636
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191574.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.44.7e-19216249134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C+ C+ttkTplWR+gp g+k+LCnaCG+++rk +
  XP_019191574.1 216 CADCNTTKTPLWRSGPKGPKSLCNACGIRQRKAR 249
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MTPPYSANSS SSPFPFELSN EDHDHHHHQN HNLNFTTPNY HNVSSSSSAH SQPSHLFLNS  60
RSSWDNQPQL YYDSDPQFFY PQHPKVDNNH AANGGSYDQG PKTKASLWRS TNCEDSNDHH  120
THDEGIIPVK WMSSKMRVMQ KMKSSGSNRA CQVATMASTA TTITTTVVAA TTTTATTEMM  180
KIIEDQKRAS SCLESEHSSN SSSNHSSSNV VPIRVCADCN TTKTPLWRSG PKGPKSLCNA  240
CGIRQRKARR AMAAAAAKAA AAAATGAAES SLNINKAKPT KEKPTTAAAK NPATGVNHHH  300
HHDEVTPFKK RYKIVAGERP SDHEAKKTKK KKKNKMNGFE DFLIKLSKNS AYHRVFPQDE  360
KDAAILLMAL SCGLVHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.14e-17GATA family protein