PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019189703.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 295aa MW: 33802.8 Da PI: 8.7013 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.3 | 2.4e-29 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCd+e+a+iifs++gkl+e++s XP_019189703.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDVEIALIIFSPRGKLHEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 57.7 | 4.9e-20 | 82 | 174 | 7 | 99 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +s+e + e+lq+e++ +k +i+ L+ ++R+llG L+s +++e + +eq++++s++ iR++K+++++++ie+l +k k l en +L +k++ XP_019189703.1 82 SSVEGQPIEQLQHEIEVMKHKIDCLEASKRRLLGLRLGSSTFEEVEMIEQHVQRSVNIIRARKMKIFKDSIEQLEEKGKVLTAENAMLWEKYK 174 347888899*******************************************************************************99975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence |
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD VEIALIIFSP RGKLHEFASS 60 SSQEIIEKYR KHVMNNRAEN PSSVEGQPIE QLQHEIEVMK HKIDCLEASK RRLLGLRLGS 120 STFEEVEMIE QHVQRSVNII RARKMKIFKD SIEQLEEKGK VLTAENAMLW EKYKGLEPHK 180 VSKEEDDSHD STLYVNGGDE KSDVETELFI GLPEGFRQLT SEIPTFRQQS NRRTVANHGE 240 GDQGGDVKLL SLNLLGSIYK LKSYCFRLVF GNERCALSLN LRGFDLLLIV YCVKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 1e-63 | MIKC_MADS family protein |