PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019189665.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | TCP | ||||||||
Protein Properties | Length: 343aa MW: 37505.1 Da PI: 8.3874 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 140.6 | 1.2e-43 | 107 | 254 | 3 | 133 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssaseceaesssssasn 84 kkdrhskihT+ g+RdRR+Rls+++a++fFdLqd+LGfdk+skt++WLl ++ aik+l ++ +ss secea+s + +++ XP_019189665.1 107 SKKDRHSKIHTAHGPRDRRMRLSLDVARKFFDLQDMLGFDKASKTVDWLLLNSRLAIKDLKQQnhcaaaagggggsAASSTSECEAASGVLDQEF 201 59*************************************************************99999999998765555578888888888884 PP TCP 85 sssg....kaaksaakskksqksaasalnlakesrakarararertrekmrik 133 + +++k+ + k++ + a+++ lakesr+kar+rarert+ k++++ XP_019189665.1 202 EPPMaahgSKEKKGTAAKPAGRVRAAFNPLAKESRNKARERARERTKMKNNNN 254 444466666666666778888888888********************999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence |
MYPCSSSSST INICNFIYNN TPIPTSPMQY EDEHVLLQHI HTLLLQQEAD NFAAITPAAA 60 AAAAESGILN NSNDLQYFEN SSSTMMMTMK SNSASSNVVV VGKKKCSKKD RHSKIHTAHG 120 PRDRRMRLSL DVARKFFDLQ DMLGFDKASK TVDWLLLNSR LAIKDLKQQN HCAAAAGGGG 180 GSAASSTSEC EAASGVLDQE FEPPMAAHGS KEKKGTAAKP AGRVRAAFNP LAKESRNKAR 240 ERARERTKMK NNNNIMLGET PPPRQEMGGA THNVVKTTNN EPPSHQALPP MAAEELATSH 300 IHEHNWSLSN IFPPAATSHQ QHQFGEFPYS GKFCWEGYND GNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68800.1 | 1e-21 | TCP family protein |