PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019189381.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 360aa    MW: 40063.2 Da    PI: 7.8298
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019189381.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.71e-08173220455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L+ l+P +    +k   Ka +L + ++Y++sLq
  XP_019189381.1 173 SHSLAERVRREKISERMKILQGLVPGC----DKVTGKALMLDEIINYVQSLQ 220
                     8*************************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MATFPSYQCL LDSTSSVFLH PNSPPIYKMP SASFLDEPND CFSQFYQSES LQELSTVSHG  60
LVSHYKNNIN EASLSPSPSS SVTNKPESGE QLTYQSPPLM AKKRKSKHAS SMNSAQSKNV  120
KEGEEGKRQR KGGNGKALKD GKEKKTKEDK KCPEEAPTGY IHVRARRGQA TDSHSLAERV  180
RREKISERMK ILQGLVPGCD KVTGKALMLD EIINYVQSLQ NQVEFLSMKL ASVSPMFYDY  240
GMDLDTLMVR PDQEMNIQRV NGLTLPMPNM QQCNPTTTHT PPAVVSDANT VLTIPSSPPN  300
CDDFSLLDPS APPLFQHPPH LLNNNLFNQG NGQLLWGVED QRQKFINQNG FTSNNLCSFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.23e-54bHLH family protein