PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019189144.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | GRAS | ||||||||
Protein Properties | Length: 141aa MW: 15970.6 Da PI: 8.6144 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 146.2 | 3.1e-45 | 11 | 139 | 1 | 139 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 lv++L++cAeav++++++la+al+++++ la +++ m+++a yf+eALa+r+++ + p++t e++ +++l++ f+e++P+lkf+h XP_019189144.1 11 LVHALMACAEAVQQENFKLADALVKHIRILAVSQAGRMRKVANYFAEALARRIYK--------IYPQDTLESSYTDVLQM--HFYETCPYLKFAH 95 689***************************************************9........44666655555555544..4************ PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegp 139 +taNqaIl+a+ ++rvH+iD+ ++qG+QWp L+qaLa Rp+g+ XP_019189144.1 96 FTANQAILKAFTDCSRVHVIDLCLKQGMQWPVLMQALALRPSGS 139 *****************************************875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 141 aa Download sequence |
MVDYQEAGVR LVHALMACAE AVQQENFKLA DALVKHIRIL AVSQAGRMRK VANYFAEALA 60 RRIYKIYPQD TLESSYTDVL QMHFYETCPY LKFAHFTANQ AILKAFTDCS RVHVIDLCLK 120 QGMQWPVLMQ ALALRPSGST G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G66350.1 | 2e-70 | GRAS family protein |