PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019188972.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | TCP | ||||||||
Protein Properties | Length: 160aa MW: 17561.8 Da PI: 7.597 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 65.4 | 2e-20 | 48 | 96 | 10 | 61 |
TCP 10 kihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaike 61 k+ + g++RRvRl+ +caar+F+L++eLG+ +d++t+eWLl+ p++ XP_019188972.1 48 KR---GKGSGRRVRLPPLCAARIFQLTRELGHRTDGQTVEWLLRHVHPSVFP 96 44...6799************************************9999854 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
MEPYRYNATR QEDETFVVLP SPYPRPSPPP LSSSTPAPLA PARPVTKKRG KGSGRRVRLP 60 PLCAARIFQL TRELGHRTDG QTVEWLLRHV HPSVFPSSYA ATAVDSPSSA TEDLSPPYYP 120 QIPAAVPETD QDAVGPTSFT ALLMQAEKGD FVVKQEMGDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08330.1 | 3e-18 | TCP family protein |