PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019187457.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 690aa MW: 74179.7 Da PI: 6.7413

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019187457.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.8e-09	403	440	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + XP_019187457.1 403 FEHflHPYPKDSDKIMLAKQTGLTRNQVSNWFINARVR 440 554459******************************88 PP
2	BELL	119.6	1.4e-38	266	337	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eV++rY+qy++q+q+vis Fe++ag+gsak Yt+lAl++iS++FrcLkdai +qi XP_019187457.1 266 ERQEIQMKKAKLVNMLDEVEQRYRQYHHQMQIVISWFEQAAGIGSAKTYTALALQTISKQFRCLKDAILGQI 337 79********************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MATYFHGNSE IQAGGDGLQT LILMNPAGYV GFSDAPQQGQ APPGSNFIFL NSNGPGSSIS 60 FAHAPPSQSQ QQYVGIPLAT TASAPPSTQE VHASAAAAHS QHDITALHGF LGRPQYNLYA 120 PPMELAAARD VTRAQQGLSL SLSSQQPGFG NFRLEREVGS QQLVTAISPT AGDEVRVSGG 180 SPSSASGVSN GVNGVQSVLL SSKYLKAAQE LLEEVVNVGK GVKAPTESSK EANCPAKNPG 240 DSSGAGDGQT GGESSGKRAT ELTTAERQEI QMKKAKLVNM LDEVEQRYRQ YHHQMQIVIS 300 WFEQAAGIGS AKTYTALALQ TISKQFRCLK DAILGQIRAA SKSLGEEDGL GGKIEGSSRL 360 KFVDNQLRQQ RALQQLGMIQ HNAWRPQRGL PERSVSVLRA WLFEHFLHPY PKDSDKIMLA 420 KQTGLTRNQV SNWFINARVR LWKPMVEEMY LEEIKEQEQN GSENKTGKGE PNEDSVSHHQ 480 DKSPGGSDHQ ENMSFAQNQS TSPTGITIRN QPGGFNLIGP SEMESITQGS PKKPRSADML 540 HSPSSVPSIS IDAKPADEQG SMKFMNDRQN REGFTLLGGS TNFMGGFGSY PIGGFSTEQF 600 PGIPAAPYSG NAVSLTLGLP PSENLPMSAT HHAFLPTQDI HMGRGVEMGE ANEFGGMTTP 660 TSAHPTSVYE SFNLQNRKRF AATLLPDFVA

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MATYFHGNSE IQAGGDGLQT LILMNPAGYV GFSDAPQQGQ APPGSNFIFL NSNGPGSSIS  60
FAHAPPSQSQ QQYVGIPLAT TASAPPSTQE VHASAAAAHS QHDITALHGF LGRPQYNLYA  120
PPMELAAARD VTRAQQGLSL SLSSQQPGFG NFRLEREVGS QQLVTAISPT AGDEVRVSGG  180
SPSSASGVSN GVNGVQSVLL SSKYLKAAQE LLEEVVNVGK GVKAPTESSK EANCPAKNPG  240
DSSGAGDGQT GGESSGKRAT ELTTAERQEI QMKKAKLVNM LDEVEQRYRQ YHHQMQIVIS  300
WFEQAAGIGS AKTYTALALQ TISKQFRCLK DAILGQIRAA SKSLGEEDGL GGKIEGSSRL  360
KFVDNQLRQQ RALQQLGMIQ HNAWRPQRGL PERSVSVLRA WLFEHFLHPY PKDSDKIMLA  420
KQTGLTRNQV SNWFINARVR LWKPMVEEMY LEEIKEQEQN GSENKTGKGE PNEDSVSHHQ  480
DKSPGGSDHQ ENMSFAQNQS TSPTGITIRN QPGGFNLIGP SEMESITQGS PKKPRSADML  540
HSPSSVPSIS IDAKPADEQG SMKFMNDRQN REGFTLLGGS TNFMGGFGSY PIGGFSTEQF  600
PGIPAAPYSG NAVSLTLGLP PSENLPMSAT HHAFLPTQDI HMGRGVEMGE ANEFGGMTTP  660
TSAHPTSVYE SFNLQNRKRF AATLLPDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-147	TALE family protein