PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019187456.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 690aa MW: 74179.7 Da PI: 6.7413 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.4 | 2.8e-09 | 403 | 440 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + XP_019187456.1 403 FEHflHPYPKDSDKIMLAKQTGLTRNQVSNWFINARVR 440 554459******************************88 PP | |||||||
2 | BELL | 119.6 | 1.4e-38 | 266 | 337 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eV++rY+qy++q+q+vis Fe++ag+gsak Yt+lAl++iS++FrcLkdai +qi XP_019187456.1 266 ERQEIQMKKAKLVNMLDEVEQRYRQYHHQMQIVISWFEQAAGIGSAKTYTALALQTISKQFRCLKDAILGQI 337 79********************************************************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 690 aa Download sequence |
MATYFHGNSE IQAGGDGLQT LILMNPAGYV GFSDAPQQGQ APPGSNFIFL NSNGPGSSIS 60 FAHAPPSQSQ QQYVGIPLAT TASAPPSTQE VHASAAAAHS QHDITALHGF LGRPQYNLYA 120 PPMELAAARD VTRAQQGLSL SLSSQQPGFG NFRLEREVGS QQLVTAISPT AGDEVRVSGG 180 SPSSASGVSN GVNGVQSVLL SSKYLKAAQE LLEEVVNVGK GVKAPTESSK EANCPAKNPG 240 DSSGAGDGQT GGESSGKRAT ELTTAERQEI QMKKAKLVNM LDEVEQRYRQ YHHQMQIVIS 300 WFEQAAGIGS AKTYTALALQ TISKQFRCLK DAILGQIRAA SKSLGEEDGL GGKIEGSSRL 360 KFVDNQLRQQ RALQQLGMIQ HNAWRPQRGL PERSVSVLRA WLFEHFLHPY PKDSDKIMLA 420 KQTGLTRNQV SNWFINARVR LWKPMVEEMY LEEIKEQEQN GSENKTGKGE PNEDSVSHHQ 480 DKSPGGSDHQ ENMSFAQNQS TSPTGITIRN QPGGFNLIGP SEMESITQGS PKKPRSADML 540 HSPSSVPSIS IDAKPADEQG SMKFMNDRQN REGFTLLGGS TNFMGGFGSY PIGGFSTEQF 600 PGIPAAPYSG NAVSLTLGLP PSENLPMSAT HHAFLPTQDI HMGRGVEMGE ANEFGGMTTP 660 TSAHPTSVYE SFNLQNRKRF AATLLPDFVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G35940.1 | 1e-147 | TALE family protein |