PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019187227.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 257aa    MW: 29063.6 Da    PI: 5.4716
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019187227.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM134.66.5e-4281392128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk...kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                     ppGfrF Pt+eelv++yLk+k+eg+  e  +v i+ ++iy+++Pw+Lp+   k++  + ++w+fF++ ++++a+g r++r t+ gyWkatg+   
  XP_019187227.1   8 PPGFRFFPTEEELVSFYLKNKLEGRFEEHIDVvIPVLNIYDHDPWSLPQfagKYNRsDPEQWFFFIPMQEREARGGRPTRLTAGGYWKATGSPGL 102
                     8***********************9966656659999***********646633332556*********************************** PP

             NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     v+s +++++g k+t+vfy+grap+g+kt+W m+eyr+
  XP_019187227.1 103 VYSGNNRVIGGKRTMVFYTGRAPNGRKTEWKMKEYRF 139
                     ***********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MEEDDFPPPG FRFFPTEEEL VSFYLKNKLE GRFEEHIDVV IPVLNIYDHD PWSLPQFAGK  60
YNRSDPEQWF FFIPMQEREA RGGRPTRLTA GGYWKATGSP GLVYSGNNRV IGGKRTMVFY  120
TGRAPNGRKT EWKMKEYRFS EREASNNSPQ EFILCRVYKK PKCARAFDRR PACMAPAPPA  180
AEGGEPALLQ PPPPPMAAAA NDASASTSLQ KADKKSSSQE TSSPSPPHGG DSVEDDPVWD  240
FSDQILFEWD PFKILYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.16e-61NAC family protein