PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019186509.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | WOX | ||||||||
Protein Properties | Length: 146aa MW: 17040.4 Da PI: 9.9288 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 54.9 | 1.5e-17 | 25 | 86 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++t eqle Leel++k + ps+ee+e+L+ +l +++ ++V++WFqN+R +e++ XP_019186509.1 25 SRRWKPTVEQLEMLEELYYKqrMMRPSTEEIERLSLRLrqlgKIEAKNVFYWFQNQRNRERH 86 58****************9756889***********************************95 PP | |||||||
2 | Wus_type_Homeobox | 83.9 | 1.8e-27 | 25 | 86 | 3 | 63 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerq 63 + RW Pt eQ+++Leely+ + + P++eei+r++ +L++ Gkie kNVfyWFQN++ Rer+ XP_019186509.1 25 SRRWKPTVEQLEMLEELYYkQRMMRPSTEEIERLSLRLRQLGKIEAKNVFYWFQNQRNRERH 86 78***************98799**************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MDAEGQQCIG QKVQQGGEEN NKCSSRRWKP TVEQLEMLEE LYYKQRMMRP STEEIERLSL 60 RLRQLGKIEA KNVFYWFQNQ RNRERHPRKR PAIISPAPPA GDLLHNNYNN AAPKRSKPPQ 120 TLSLFPMHGH ADSVSLELTL RPYSPE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 2e-22 | WOX family protein |