PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019186453.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 212aa MW: 22798.8 Da PI: 6.5064 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.6 | 2.3e-05 | 51 | 73 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k Fs+k L H++ H XP_019186453.1 51 FCCKYCDKKFSTKQALGGHQNAH 73 78******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MAAEAIAEIE ELIKVHEVGE DDLQVGAAGG QSGEQADPAP HAAAVRVRLD FCCKYCDKKF 60 STKQALGGHQ NAHRMEKNGN RSGRRGGFMD YDFLHPHFLC SPLAGFPPLP GGGVQVNYSY 120 QAPAATPPYF LPGNSISSPL IPTGRQPYAY PFPPETSSLR SRLPAMSIPG RNSFPVPASR 180 LAGPIVINSN PMNAPEINKD MEDGELDLTL KL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14010.1 | 2e-08 | C2H2 family protein |