PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019186261.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 553aa MW: 61364.8 Da PI: 7.4077

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019186261.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.7	3.8e-11	263	302	5	44
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++ XP_019186261.1 263 KTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLTQLEQE 302 7789************************876666665554 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MGSERALFEL HSDHHHHHHH HHHHQDNSGD KVFVGVPLMA SGKSSDPTQQ QQHHHHHQQQ 60 QHSSVGCSNQ ISFAQPAAVA PPQLHFQLQD HHHHQPPPQP QSNQISFGML HSPPSSSSAI 120 PPPHPGNFIS KDSSGAYDLG ELDQALFLYL DGHQESSSIQ DHRQNSGMRP PTLNIFPSQP 180 MHVDPSSTKG NAGLVSLETG SSRRASQPSM EVSATPKNDV VAGASASSTP EPPKPPKREG 240 HRRSSSAGTA ADPSDGPKTP DPKTLRRLAQ NREAARKSRL RKKAYVQQLE TSRIKLTQLE 300 QELQRARAQG IYFGGSAIIG GEQGLPVMGN ISSDAAVFDM EYARWQEEHH RLLCELRSAV 360 QEHLPENELR MYVDNCLAHF DQMIHLKSII AKSDVFHLVS GMWKTPAERC FMWMGGFRPS 420 ELLKVIVSQI EPLTEQQLIE LCGLQQSTHE AEEALSQGLG ALNHSLSDTI AADSLSYPSN 480 MGNYMGQMAA AITKLSTLEG FVRQADNLRH QTMHRLHQIL TTRQAARCLL AIAEYFHRLR 540 ALSALWLARP KQE

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MGSERALFEL HSDHHHHHHH HHHHQDNSGD KVFVGVPLMA SGKSSDPTQQ QQHHHHHQQQ  60
QHSSVGCSNQ ISFAQPAAVA PPQLHFQLQD HHHHQPPPQP QSNQISFGML HSPPSSSSAI  120
PPPHPGNFIS KDSSGAYDLG ELDQALFLYL DGHQESSSIQ DHRQNSGMRP PTLNIFPSQP  180
MHVDPSSTKG NAGLVSLETG SSRRASQPSM EVSATPKNDV VAGASASSTP EPPKPPKREG  240
HRRSSSAGTA ADPSDGPKTP DPKTLRRLAQ NREAARKSRL RKKAYVQQLE TSRIKLTQLE  300
QELQRARAQG IYFGGSAIIG GEQGLPVMGN ISSDAAVFDM EYARWQEEHH RLLCELRSAV  360
QEHLPENELR MYVDNCLAHF DQMIHLKSII AKSDVFHLVS GMWKTPAERC FMWMGGFRPS  420
ELLKVIVSQI EPLTEQQLIE LCGLQQSTHE AEEALSQGLG ALNHSLSDTI AADSLSYPSN  480
MGNYMGQMAA AITKLSTLEG FVRQADNLRH QTMHRLHQIL TTRQAARCLL AIAEYFHRLR  540
ALSALWLARP KQE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06839.3	1e-180	bZIP family protein