PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019186259.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 554aa MW: 61478.9 Da PI: 7.4077

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019186259.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.7	3.8e-11	264	303	5	44
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++ XP_019186259.1 264 KTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLTQLEQE 303 7789************************876666665554 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MGSERALFEL HSDHHHHHHH HHHHQDNSGD KVFVGVPLMA SGKSSDPTQQ QQHHHHHQQQ 60 QHSSVGCSNQ ISFAQPAAVA PPQLHFQLQD HHHHQPPPQP QSNQISFGML HSPPSSSSAI 120 PPPHPGNFIS KDSSGAYDLG ELDQALFLYL DGHQESSSIQ DHRQNSGMRP PTLNIFPSQP 180 MHVDPSSTNK GNAGLVSLET GSSRRASQPS MEVSATPKND VVAGASASST PEPPKPPKRE 240 GHRRSSSAGT AADPSDGPKT PDPKTLRRLA QNREAARKSR LRKKAYVQQL ETSRIKLTQL 300 EQELQRARAQ GIYFGGSAII GGEQGLPVMG NISSDAAVFD MEYARWQEEH HRLLCELRSA 360 VQEHLPENEL RMYVDNCLAH FDQMIHLKSI IAKSDVFHLV SGMWKTPAER CFMWMGGFRP 420 SELLKVIVSQ IEPLTEQQLI ELCGLQQSTH EAEEALSQGL GALNHSLSDT IAADSLSYPS 480 NMGNYMGQMA AAITKLSTLE GFVRQADNLR HQTMHRLHQI LTTRQAARCL LAIAEYFHRL 540 RALSALWLAR PKQE

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MGSERALFEL HSDHHHHHHH HHHHQDNSGD KVFVGVPLMA SGKSSDPTQQ QQHHHHHQQQ  60
QHSSVGCSNQ ISFAQPAAVA PPQLHFQLQD HHHHQPPPQP QSNQISFGML HSPPSSSSAI  120
PPPHPGNFIS KDSSGAYDLG ELDQALFLYL DGHQESSSIQ DHRQNSGMRP PTLNIFPSQP  180
MHVDPSSTNK GNAGLVSLET GSSRRASQPS MEVSATPKND VVAGASASST PEPPKPPKRE  240
GHRRSSSAGT AADPSDGPKT PDPKTLRRLA QNREAARKSR LRKKAYVQQL ETSRIKLTQL  300
EQELQRARAQ GIYFGGSAII GGEQGLPVMG NISSDAAVFD MEYARWQEEH HRLLCELRSA  360
VQEHLPENEL RMYVDNCLAH FDQMIHLKSI IAKSDVFHLV SGMWKTPAER CFMWMGGFRP  420
SELLKVIVSQ IEPLTEQQLI ELCGLQQSTH EAEEALSQGL GALNHSLSDT IAADSLSYPS  480
NMGNYMGQMA AAITKLSTLE GFVRQADNLR HQTMHRLHQI LTTRQAARCL LAIAEYFHRL  540
RALSALWLAR PKQE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06839.3	0.0	bZIP family protein