PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019185498.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 297aa MW: 33323.5 Da PI: 5.1979

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019185498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.4	7.8e-55	13	139	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +k + +++ +i evd+++vePw+Lp +++ +ekewyfF+ rd+ky+tg r+nrat+sgyWkatgkdke+++ XP_019185498.1 13 LPPGFRFHPTDEELITHYLSPKSVDAAFSA-VAIGEVDLNRVEPWELPWRARMGEKEWYFFCVRDRKYPTGMRTNRATESGYWKATGKDKEIFT- 105 79***********************999.67***********8888999***********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++lvg+kktLvfy+grap+ge+t+Wvmheyrle XP_019185498.1 106 AKTLVGMKKTLVFYSGRAPRGERTNWVMHEYRLE 139 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MENPSVFDDE MNLPPGFRFH PTDEELITHY LSPKSVDAAF SAVAIGEVDL NRVEPWELPW 60 RARMGEKEWY FFCVRDRKYP TGMRTNRATE SGYWKATGKD KEIFTAKTLV GMKKTLVFYS 120 GRAPRGERTN WVMHEYRLEG NHQTFQTEWV ICRIFKKTAG GKKIHISALI GGGGDCSKNS 180 TPPSTSLPPL MDISQTTCFS DSADDDQKPI MASSFASSPS PSKNSDVSPA PLIFPADPTP 240 TYFHSDQMIP YADNMDFSDS GMTQQDHSIT RFLLEEPPFL MTSAAAGPVD IGCLWDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-95	NAC family protein