PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019185164.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 234aa MW: 26735.3 Da PI: 8.0752 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 82 | 3.8e-26 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +i+n + rqvtfskRr g++KKAeELSvLCda+va+i+fss+ kl+ ys+ XP_019185164.1 10 KIDNVTARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSSAKLFHYSN 59 69**********************************************85 PP | |||||||
2 | K-box | 46.5 | 1.6e-16 | 95 | 173 | 20 | 99 |
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++ k+ e+ qr R++ Ge+L++Ls++eLqqLe+ L+ +l ++ +kK e ++++i++lq+k l een++Lr+++ XP_019185164.1 95 HSRSSKEIAEKTQRL-RQMRGEELQELSIEELQQLERSLQIGLDHVINKKGEKIMKEINQLQEKGVHLMEENERLRQQVV 173 445555556666665.*************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MARDKIQIRK IDNVTARQVT FSKRRRGLFK KAEELSVLCD ADVALIVFSS SAKLFHYSNS 60 SMREILEKRN LHSKNLQKMG LQPSVELQLV ENSNHSRSSK EIAEKTQRLR QMRGEELQEL 120 SIEELQQLER SLQIGLDHVI NKKGEKIMKE INQLQEKGVH LMEENERLRQ QVVETSKGQR 180 SMAVAPRDSE NLLNEEGGLS SESVTNACKY PGTPQDYYED CSDTSLKLGL PYTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-86 | MIKC_MADS family protein |