PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019184464.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 358aa MW: 41095.7 Da PI: 6.5495

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019184464.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174.6	2.9e-54	8	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eelv +yL++kv++ k++l +vi++vd+y++ePwd+++ ++e++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+v XP_019184464.1 8 VPPGFRFHPTEEELVGYYLNRKVNSLKIDL-DVITDVDLYRIEPWDIQErckLGYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAV 101 69**************************.9***********953432233677******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s +++ +g++ktLvfy+grap+g+kt+W+mheyrl XP_019184464.1 102 MS-QEKMIGMRKTLVFYRGRAPNGKKTHWIMHEYRL 136 .9999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MEMMECCVPP GFRFHPTEEE LVGYYLNRKV NSLKIDLDVI TDVDLYRIEP WDIQERCKLG 60 YEEQNEWYFF SHKDRKYPTG TRTNRATAAG FWKATGRDKA VMSQEKMIGM RKTLVFYRGR 120 APNGKKTHWI MHEYRLQSSE HAPPQEEGWV VCRAFKKPIP NNNKPAGYEP WNNNINHSSN 180 YYVRDNNNNN NNNCSYMPTT TTTLNASNNN TPIHHHQSSV INAATFNHQL GTNFPQYPFT 240 PPPQHHHLSH GGGYDQINQQ LVELPQLDSP TVSTKDGGGA TASEDHEDVV DRNSYGGDHS 300 WKDLDYKMIA PAPAPAQGVM MNDDHPVLPS YSFANMPLLI RDDDRNHFSH LLECFPDL

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MEMMECCVPP GFRFHPTEEE LVGYYLNRKV NSLKIDLDVI TDVDLYRIEP WDIQERCKLG  60
YEEQNEWYFF SHKDRKYPTG TRTNRATAAG FWKATGRDKA VMSQEKMIGM RKTLVFYRGR  120
APNGKKTHWI MHEYRLQSSE HAPPQEEGWV VCRAFKKPIP NNNKPAGYEP WNNNINHSSN  180
YYVRDNNNNN NNNCSYMPTT TTTLNASNNN TPIHHHQSSV INAATFNHQL GTNFPQYPFT  240
PPPQHHHLSH GGGYDQINQQ LVELPQLDSP TVSTKDGGGA TASEDHEDVV DRNSYGGDHS  300
WKDLDYKMIA PAPAPAQGVM MNDDHPVLPS YSFANMPLLI RDDDRNHFSH LLECFPDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71930.1	1e-101	NAC family protein