PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019184377.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 284aa    MW: 32060.4 Da    PI: 8.156
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019184377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM912.1e-2831231129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGf+F+Ptdeel+++yL +kv ++++ + e+i+e+d++++e +dLp+++k + ke y+F+ rdk+++ + r+    ++g Wkatgk+ + ++ 
  XP_019184377.1   3 LPPGFQFNPTDEELITHYLYPKVVDSTFCA-EHIAEIDMNRFEARDLPATAKMGGKERYYFCVRDKTQPPELRT---SSAGHWKATGKSSKKIC- 92 
                     79*************************999.88***************9889999***********99876555...55799******777666. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                      + +  lk+tLv+ + +   + + + vmheyrle
  XP_019184377.1  93 -RIEANLKTTLVYQSST--GSAEKNCVMHEYRLE 123
                     .57799*******8433..3347799******85 PP
2RWP-RK46.95.4e-15156204452
          RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     +i+++d++k+F +++ +AAke gv+ ++ Kr+CR++ I+RW   k k++
  XP_019184377.1 156 SINIDDIEKCFGMSLDEAAKECGVSRSTFKRACRRHKIQRWQTKKKKKV 204
                     7999*************************************99888775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MELPPGFQFN PTDEELITHY LYPKVVDSTF CAEHIAEIDM NRFEARDLPA TAKMGGKERY  60
YFCVRDKTQP PELRTSSAGH WKATGKSSKK ICRIEANLKT TLVYQSSTGS AEKNCVMHEY  120
RLEGIKNSMR HLPENAKNEW VICKVFWKSS GSLVESINID DIEKCFGMSL DEAAKECGVS  180
RSTFKRACRR HKIQRWQTKK KKKVSQQGDE HEQTVQDDHQ SNNLGIGNGI MASSSMCTTK  240
STTSPPSPSL LVKVEHDNDV VMFVLSNVTV EGLKRGFEEI QIGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.16e-51NAC family protein