PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019184369.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 320aa    MW: 37167.3 Da    PI: 6.0104
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019184369.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM101.41.2e-31271432129
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                     p G+rF Ptdeel++++L++k+e+ ++ + + i+ vd++++e       v+ +e++ +fF++rd   +    + ++  +g+W++tg+d+e+++ +
  XP_019184369.1  27 PLGYRFYPTDEELINHFLRRKIEDPSFFT-TDIEVVDLNSSESG-----VHVGERKRFFFCRRDMIMKY--ATGQI--QGFWESTGEDREIFK-G 110
                     89***********************9877.55999999999843.....3458899*******986542..33333..6**************.9 PP

             NAM  97 gelvglkktLvfykgrapkgektdWvmheyrle 129
                     ++l+g+k+t++fy+grap++e+t+Wvmheyrle
  XP_019184369.1 111 KALIGMKETMIFYRGRAPSAERTNWVMHEYRLE 143
                     9******************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MSGFCGSNDS VESSPVEKDS GDSIRIPLGY RFYPTDEELI NHFLRRKIED PSFFTTDIEV  60
VDLNSSESGV HVGERKRFFF CRRDMIMKYA TGQIQGFWES TGEDREIFKG KALIGMKETM  120
IFYRGRAPSA ERTNWVMHEY RLEDDNLPQN AKNEWVIREF FLENKTYIPP YVLQTLAWAS  180
KSILDHDEGE VGKHNVNCCC CCRRSSLKRK DNNNEYVGGV MRQLKPKLTT MEENSIVFRV  240
RFNNDTVRLQ PRFATMDFLK AAILNRFKTL ESVKFYIQYK DGEGYMITLA IDEDLHYCLE  300
FFKSTGSPVT LSLADVLLEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.14e-47NAC family protein