PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019183649.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NF-YB | ||||||||
Protein Properties | Length: 248aa MW: 28159.6 Da PI: 7.0613 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 90.9 | 1.2e-28 | 100 | 189 | 5 | 94 |
NF-YB 5 drflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 ++ +P++ + +im +++ +n +i++daketvq+cv+efi +vt++a++++++e+rkt+ +ddllwa+ G+ +y+e l+ ++ y e + XP_019183649.1 100 QNDIPLSIILKIMGRAIHGNMRIADDAKETVQKCVTEFIHYVTAKANERSRQEQRKTVIADDLLWAMNAPGLRNYAEVLTDFIISYCEQQ 189 56689*********************************************************************************8864 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MYKLPLQFES LRRFAVEPSS ESRDVVEPSS ESRDAVEPER EAFADSPWSI RRRAEMPWSL 60 RRRAEMPWSL RRRAETPWAM AGETNANTVA LTQQRRRAPQ NDIPLSIILK IMGRAIHGNM 120 RIADDAKETV QKCVTEFIHY VTAKANERSR QEQRKTVIAD DLLWAMNAPG LRNYAEVLTD 180 FIISYCEQQE YDRAATHPLP PPIHHVPFNS YAVQQGFSVP EFSPGPMNNT GGSASSSSPY 240 GSGYFIDS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21970.1 | 4e-27 | NF-YB family protein |