PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019183436.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 336aa    MW: 38304.9 Da    PI: 8.8239
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019183436.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM158.62.6e-49221512128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                      pGfrFhPtdeelv +yL +kv+++ l+l ++ik++diyk++PwdLpk + + +e+ewyfF+kr +ky+++ r+nr+t sg+Wkatg d+e++++
  XP_019183436.1  22 LPGFRFHPTDEELVGFYLLRKVQNRLLPL-DFIKQIDIYKFDPWDLPKtASSVGENEWYFFCKRGRKYKNSIRPNRVTGSGFWKATGIDREIHAA 115
                     69***************************.99***************525555899*************************************99 PP

             NAM  96 ...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        +++ +glkk+Lv+y+g+a kg+kt+W+mhe+rl
  XP_019183436.1 116 aagRRHCIGLKKSLVYYRGSAGKGTKTEWMMHEFRL 151
                     8877778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MENLASDKHN QKHDDDDDDM FLPGFRFHPT DEELVGFYLL RKVQNRLLPL DFIKQIDIYK  60
FDPWDLPKTA SSVGENEWYF FCKRGRKYKN SIRPNRVTGS GFWKATGIDR EIHAAAAGRR  120
HCIGLKKSLV YYRGSAGKGT KTEWMMHEFR LPPQHHKSSS AAIPTHPKNI AQEAEVWTLC  180
RILKRKSMSE WKELTAAKRN STNPSAETCS NESPGGNQLL QENYISFSNP LNDVNLTKHN  240
HEARRPFGGI SVNVDNPNDN NVDYHIIYGS HQQQLLRGQQ INNNNHVSQS PYPLPPAANS  300
LLSSFTSATP EIINGFPKHA DWEELRSVIL GFSTHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-79NAC family protein