PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019183193.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 715aa MW: 77404.1 Da PI: 6.1567

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019183193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.3	2.9e-32	305	362	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g Hnh+k XP_019183193.1 305 DDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSH-EGHITEIIYKGAHNHQK 362 8**************************************.*************85 PP
2	WRKY	103.7	9.8e-33	510	568	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ XP_019183193.1 510 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHD 568 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 715 aa Download sequence
MAGFGDHMPI MGDWVPPSPS PRAFFSSFLG DDDVGSRSNA EPTSENKSQP LLPDPKEYAN 60 SDSKNGAQGD QTAKLSSLSE RNNMNSHGGL LERMAARAGF SIPKLKTDSI RPPALVQNQE 120 LRSPYFTIPP GLSPTTLLDS PVFLSNSLVQ SSPTTGKFAF PLIGDSLNSA LFMGASDNNN 180 GTSSFAFKPV IETETGPSLF PETIGKVPPS SLSWQPVPGI EVSVHSEKNP LVHQRVEPTL 240 VHTQSGTVFS RSYTEGGSNI TSEPRTFQTV AGSMEQSPPP DEQQDEDIDQ RGGGDPNAVG 300 APADDDGYNW RKYGQKQVKG SEYPRSYYKC THPNCPVKKK VERSHEGHIT EIIYKGAHNH 360 QKPPPNRRAA FGSENAEQDG TIGIGDPTWE NVQNGSGARA PDWGNDNLEV TSSGPLGSEY 420 CNGSATLQAQ HGTQFESRDP VEGSSPFSNE EDEDDRGTHG SVSIGYEGEG DEYDSKRRKI 480 ETYATDMSGA TRAIREPRVV VQTTSEVDIL DDGYRWRKYG QKVVKGNPNP RSYYKCTSAG 540 CTVRKHVERA SHDLKSVITT YEGKHNHDVP AARNSTHPNS GASSNLPSQT TATQGHVHRP 600 EPSQLQNTMS QFARPPSLGS FGFPGGPQLA HTLGFGFGMN QQGLANLAMA GLGPNQGKFP 660 VPQVHSYLGQ QRSMNDMRPK AEPKMEPGSD PGMNLSSDSS VYQQFTSRLP LGPQM

Sequence ? help Back to Top

Protein Sequence Length: 715 aa Download sequence

MAGFGDHMPI MGDWVPPSPS PRAFFSSFLG DDDVGSRSNA EPTSENKSQP LLPDPKEYAN  60
SDSKNGAQGD QTAKLSSLSE RNNMNSHGGL LERMAARAGF SIPKLKTDSI RPPALVQNQE  120
LRSPYFTIPP GLSPTTLLDS PVFLSNSLVQ SSPTTGKFAF PLIGDSLNSA LFMGASDNNN  180
GTSSFAFKPV IETETGPSLF PETIGKVPPS SLSWQPVPGI EVSVHSEKNP LVHQRVEPTL  240
VHTQSGTVFS RSYTEGGSNI TSEPRTFQTV AGSMEQSPPP DEQQDEDIDQ RGGGDPNAVG  300
APADDDGYNW RKYGQKQVKG SEYPRSYYKC THPNCPVKKK VERSHEGHIT EIIYKGAHNH  360
QKPPPNRRAA FGSENAEQDG TIGIGDPTWE NVQNGSGARA PDWGNDNLEV TSSGPLGSEY  420
CNGSATLQAQ HGTQFESRDP VEGSSPFSNE EDEDDRGTHG SVSIGYEGEG DEYDSKRRKI  480
ETYATDMSGA TRAIREPRVV VQTTSEVDIL DDGYRWRKYG QKVVKGNPNP RSYYKCTSAG  540
CTVRKHVERA SHDLKSVITT YEGKHNHDVP AARNSTHPNS GASSNLPSQT TATQGHVHRP  600
EPSQLQNTMS QFARPPSLGS FGFPGGPQLA HTLGFGFGMN QQGLANLAMA GLGPNQGKFP  660
VPQVHSYLGQ QRSMNDMRPK AEPKMEPGSD PGMNLSSDSS VYQQFTSRLP LGPQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-165	WRKY family protein