PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019182987.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 304aa MW: 33584.7 Da PI: 4.3921 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.1 | 7.3e-19 | 44 | 95 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +q+++Le++F +++++ e++ +LA+++gL+ rqV +WFqNrRa++k XP_019182987.1 44 RRLGVHQVKALEKYFDMENKLEPERKVKLAQEIGLQPRQVAIWFQNRRARWK 95 467789*********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 126.2 | 1.4e-40 | 41 | 133 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl +qvk+LE+ F++e+kLeperKv+la+e+glqprqva+WFqnrRAR+ktkqlE+dy +Lk++yd+lk++ e+L++++++L e+++e XP_019182987.1 41 EKKRRLGVHQVKALEKYFDMENKLEPERKVKLAQEIGLQPRQVAIWFQNRRARWKTKQLERDYGVLKANYDSLKRSYETLQHDNQDLLEQIRE 133 69**************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence |
MKRSSLGGSD SLDVYGREFR SMMEGVDEEE GGGGGGGGVG EKKRRLGVHQ VKALEKYFDM 60 ENKLEPERKV KLAQEIGLQP RQVAIWFQNR RARWKTKQLE RDYGVLKANY DSLKRSYETL 120 QHDNQDLLEQ IRELKGKMNG EDDGERKVTV TVKEEAVESF SGGGDKSKST AAVSLDIETE 180 LNFGDNHFHG GGGGGNASIF AEFKDWSSDS DSASAILNDD NSPNAAAMSS SGAAFLTASD 240 NPAQFSEIPK NILGDSYDDS QFVKIEEHNF FAAGEEPCTI LLSEEQAPTF PWCSPDDWNW 300 EDES |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 42 | 71 | KKRRLGVHQVKALEKYFDMENKLEPERKVK |
2 | 90 | 98 | RRARWKTKQ |
3 | 111 | 116 | DSLKRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65310.2 | 9e-51 | HD-ZIP family protein |