PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019182598.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 363aa MW: 41746.2 Da PI: 5.9391

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019182598.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.4	8.1e-55	14	144	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv +yL+kk++++k++l +vi+++d+y++ePwdL+ k ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v XP_019182598.1 14 VPPGFRFHPTDEELVGYYLRKKIASQKIDL-DVIRDIDLYRIEPWDLQyKcrIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAV 107 69**************************.9***********943432233667******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++k++ +g++ktLvfykgrap+g+ktdW++heyrle XP_019182598.1 108 YHKSKIIIGMRKTLVFYKGRAPNGRKTDWIIHEYRLE 144 *********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MIMADAAADE SCAVPPGFRF HPTDEELVGY YLRKKIASQK IDLDVIRDID LYRIEPWDLQ 60 YKCRIGYEEQ NEWYFFSHKD KKYPTGTRTN RATMAGFWKA TGRDKAVYHK SKIIIGMRKT 120 LVFYKGRAPN GRKTDWIIHE YRLESQDNSP PQEEGWVVCR AFKKRMPGQT RSNNAETWES 180 SRKPSNDTSV TLDPVDYYIT SSRQTTPTTS FISSSHHSFL RSKQELSSSC NNLTFFQSHQ 240 DDQFVHLPEL QSPSHPPPLQ NPATTSPSVL PESYKFHGSN REEDDDEHNN RVSDWRALDK 300 LVASQLNHDD PDDDQKRLKN QNDSDVGLLL LQSGGIWEDG DDDINGFFSS NSDCNIGICI 360 FDK

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MIMADAAADE SCAVPPGFRF HPTDEELVGY YLRKKIASQK IDLDVIRDID LYRIEPWDLQ  60
YKCRIGYEEQ NEWYFFSHKD KKYPTGTRTN RATMAGFWKA TGRDKAVYHK SKIIIGMRKT  120
LVFYKGRAPN GRKTDWIIHE YRLESQDNSP PQEEGWVVCR AFKKRMPGQT RSNNAETWES  180
SRKPSNDTSV TLDPVDYYIT SSRQTTPTTS FISSSHHSFL RSKQELSSSC NNLTFFQSHQ  240
DDQFVHLPEL QSPSHPPPLQ NPATTSPSVL PESYKFHGSN REEDDDEHNN RVSDWRALDK  300
LVASQLNHDD PDDDQKRLKN QNDSDVGLLL LQSGGIWEDG DDDINGFFSS NSDCNIGICI  360
FDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-133	NAC family protein