PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019181508.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | GATA | ||||||||
Protein Properties | Length: 275aa MW: 29953.4 Da PI: 8.1521 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 60.8 | 1.7e-19 | 189 | 223 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+ kTp+WR gp g+ktLCnaCG++y++ +l XP_019181508.1 189 CQHCGVDKTPQWRAGPMGPKTLCNACGVRYKSGRL 223 *******************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MKLDACFMVD GDDLLNFTLD DGEGEKDANH AAAIGTSPVV SSSLGSSKSV NPDDFPEDME 60 EELEWLSNKD AFPGVETCFG IFGENPLFDH KSPVSVLENS SSTSNSNSNS NSGGNGMISC 120 YDSLRVPVNY PTRPRSKNRK RRETGIGYLP LRNCLWVNHV KNKNHRQQSS FKALPATAAG 180 ETPTIGRRCQ HCGVDKTPQW RAGPMGPKTL CNACGVRYKS GRLLPEYRPA NSPTFSAAVH 240 SNSHRKVLEM RRQKVGGKDG IPSNEACGYR VASGE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24050.1 | 3e-47 | GATA family protein |