PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019181309.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 167aa    MW: 18844.8 Da    PI: 10.0358
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019181309.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.91.7e-081364555
                    HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                     n  E++RR+++++ + +L +l+   ++ +  +K    + L +A++YIk+L+
  XP_019181309.1 13 RNLTEKNRRQQMKDLYRRLASLVSRkNTLPLLEKSPAFDLLGEATDYIKQLE 64
                    5999*********************7766666777777************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MKPTSSSPPR PGRNLTEKNR RQQMKDLYRR LASLVSRKNT LPLLEKSPAF DLLGEATDYI  60
KQLEGNVNEL KARKDSLQLP VVIISVNESE TGEILEINIV CGSENKNLKL HKVFCILKEE  120
GVEVVSAYSS TMGLKIYHTI LSKAFSPRLG MDTNRVQERL KNFISSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.11e-21bHLH family protein