PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019181155.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 248aa MW: 27983.6 Da PI: 9.0254

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019181155.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166	1.3e-51	14	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLk kv + +l++ ++i+evdi+k++PwdLp e+e yfFs+r+ ky++g+r+nrat sgyWkatg dk+++s+ XP_019181155.1 14 LPPGFRFHPTDEELVVQYLKCKVLRCPLPA-SIIPEVDICKSDPWDLPGD---LEQERYFFSTREVKYPNGNRSNRATGSGYWKATGLDKQIVSS 104 79**************************.89***********54...46799********************************9 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++lvg+kktLvfykg+ pkg++tdW+mheyrl XP_019181155.1 105 kgHRHLVGMKKTLVFYKGKPPKGTRTDWIMHEYRL 139 666677*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MEKLSFVKNG VLRLPPGFRF HPTDEELVVQ YLKCKVLRCP LPASIIPEVD ICKSDPWDLP 60 GDLEQERYFF STREVKYPNG NRSNRATGSG YWKATGLDKQ IVSSKGHRHL VGMKKTLVFY 120 KGKPPKGTRT DWIMHEYRLT NAQSLPQENW VLCRIFLKKR GAKNEDENTP AQTQTEAITD 180 NRAAGLKNNS KPVFYDFLAR ERADLNLAPA SSSSGSSGVT EASCNDKTDD HEESSSCCNS 240 FTTFRTKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-100	NAC family protein