PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019180219.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 184aa MW: 20846.8 Da PI: 6.3019 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14 | 0.00015 | 31 | 53 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ F++ L H++ H XP_019180219.1 31 YECTFCKRGFTNAQALGGHMNIH 53 99*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MMSSSSDSCG EESEHVPEKF SDENAGVGRS YECTFCKRGF TNAQALGGHM NIHRKDKLKA 60 KQACNNNQQK SAEEISRKPK SNHQVYAAQI SSQQQQEQTF CYSSSRAYVK YHQFFFPSSS 120 SNPSYQFQVL DHRGHYRNFA LQHGDADLSL RVGSPDDDEE ERKEGMEVSE VDLELRLGPN 180 SAFM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43540.1 | 3e-15 | C2H2 family protein |