PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019178750.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 347aa    MW: 39472 Da    PI: 9.1994
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019178750.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.72.1e-18140230199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k +++s+v +  +l lp +f+e+h    +++++++lede+g +++  +i ++++    l++GW+ F+ +++L++gD +vF l++ ++f  +v 
  XP_019178750.1 140 FVKSMVRSHVYSCFWLGLPTRFCEDHLP--KSTVDIVLEDEEGAEYDAVYISKRTG----LSGGWRAFALDHKLDDGDALVFDLVEPTKF--KVY 226
                     89************************53..3789****************544444....***********************9876666..888 PP

                     EE-S CS
              B3  96 vfrk 99 
                     ++r+
  XP_019178750.1 227 IVRA 230
                     8876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MANDNSANSY EEARKQRVLD NKKRFEDLGI LKISKSLSDL AKSEKKSPAK QLKVRHKPNE  60
AYMLEPRRSS RARNPAPSYR DDIDVELPSF RKRSKLGSSW ASYLARPIEE VKTASYEERS  120
KALKEAEKLQ SNLQSENPSF VKSMVRSHVY SCFWLGLPTR FCEDHLPKST VDIVLEDEEG  180
AEYDAVYISK RTGLSGGWRA FALDHKLDDG DALVFDLVEP TKFKVYIVRA SHCSSQGDET  240
DAREEESGGE ETKNETAIRR KKRDAQSRDS TKSQEEVPSV VEETKNETTK PRKRRNTQSR  300
DSIKPQKEIP TIAEETKEAT QSKDSTTLQK EASATRRSAR LLSCRSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.13e-65B3 family protein