PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019177800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 579aa MW: 64625.1 Da PI: 6.179 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.8 | 0.00018 | 72 | 94 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C++ F ++ n++rH+r+H XP_019177800.1 72 HKCEKCSREFFSSINYRRHLRLH 94 79*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 579 aa Download sequence |
MPTARLSTVG SSDAMESVEG NDTLYTLISQ ATGKDPIVSG DKPIQWIQLL HALEQPDLPY 60 WPIVTPVKVQ MHKCEKCSRE FFSSINYRRH LRLHRRALNF DKESRKYRDL LGAFWNKLSL 120 EEVKEVASLN DISLKDIPGT LLVKTLTESL QTSSAWMWSL PTVYMKAGTT LMDIIEAKPS 180 RLPISSLELF SVLDDASEGT FLCAGTADSM QKYLFDDEVT KVCLELRNLA ACICFAFEQK 240 LVKAWIADKE AEALRCQKLL VEEEEAAQRR QTELLEKKRQ KKLRQKELKA KDQMSEGKAS 300 LVGSADSSEN PLVAEISSPP TLFDSDSNTL DVAEDVSDLE MIHLEMNDED IKAVELGIVQ 360 NTETKQKDGT SMETEKDKMQ NEQSFWFMSQ NEESQNECEV MIGSISVPVK NCPIHTRRTK 420 THDHAGNPEP KGLNENQECD LSLGSKTSVP SDDWVHVTRR GKGPKGRQDN EERASVKVGD 480 QNLSCATSVQ LYADGKSPSH QLPDCNTHAK VLPFSSGTAK TFLTKRWNEV VSGDHVKLVI 540 SAVPKSPGSP STHSNLQKSA PPPSAPKKHS IVGENQRRR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 276 | 283 | EKKRQKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25610.1 | 2e-83 | C2H2 family protein |