PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019177681.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 277aa    MW: 30882.1 Da    PI: 4.8042
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019177681.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.23e-136791899
                    --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                    lpk+f++ h  + + ++ ++l de+gr+ e k+ ++k++    l++GW++F  +++L  gD+vvF+l++    +l+v ++r+
  XP_019177681.1  6 LPKDFCTCHL-P-NHDTAIILVDENGRETETKYLIEKHG----LSGGWRGFSLQHNLVPGDVVVFQLIQ--PLKLKVYIVRA 79
                    9*****7774.3.35679***************777777....***********************997..77788988876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MLITGLPKDF CTCHLPNHDT AIILVDENGR ETETKYLIEK HGLSGGWRGF SLQHNLVPGD  60
VVVFQLIQPL KLKVYIVRAN DSTNIAGAIS LLDLSHYAHP IATEGLLLEG DDIEKNVLRI  120
EDAADQLTRI QHEGDNLERQ VSTSDHLSAE NVVEFSQVKN FEDFKVVVNN INIDSEISED  180
TRLKYFEMCR SRNAYLQELE EPRLNYTLIA GAITETVKIA DGIKAATLAT GRDVLEVWDR  240
TLIGVGHFSM EGGFLRGRIS ELIRLCVAAE LVAGKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.18e-27B3 family protein