PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019177406.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 203aa MW: 22541.7 Da PI: 5.1377 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51 | 3.3e-16 | 2 | 41 | 5 | 46 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 T+ E+ l+++++ +lG++ W++Iar+++ gRt++++k++w++ XP_019177406.1 2 TPNEERLILELHSKLGNR-WSKIARKLP-GRTDNEIKNYWRT 41 999***************.*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 203 aa Download sequence |
MTPNEERLIL ELHSKLGNRW SKIARKLPGR TDNEIKNYWR TQMRKEAHDK KKKKQQQKGG 60 GGGASSSPSS LSNSSSSSSG SPGEESTPAV VGANERAFYD TGGFVEAPPP PPRADNGEKM 120 GGGVKVYSMD EIWKAIESPE IQESHGGGER SMIGSAIWDD YSVWTMDYDY QEDERNLVAP 180 VSDQFYSWFD NQLDFAHNTF LTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G46130.2 | 1e-25 | MYB_related family protein |