PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019177230.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 268aa MW: 30407.4 Da PI: 6.8814

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019177230.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.3	3.1e-49	18	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtd+elv +yL++k++++++++ vi+e+d+yk+ Pw+Lp+++ +ekewyfFs+rd+ky++g+r+nra+ gyWkatg dk v + XP_019177230.1 18 LPPGFRFHPTDDELVLHYLCRKCASQPISV-PVIAEIDLYKFAPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGLGYWKATGADKLVGK- 110 79**************************.89***********7666789******************************99976. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + g+kk Lvfy g+ap+g kt+W+mheyrl XP_019177230.1 111 ---AQGIKKALVFYAGKAPRGIKTNWIMHEYRL 140 ...78************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MNIGGGIQNN RRPELDFLPP GFRFHPTDDE LVLHYLCRKC ASQPISVPVI AEIDLYKFAP 60 WQLPEMALYG EKEWYFFSPR DRKYPNGSRP NRAAGLGYWK ATGADKLVGK AQGIKKALVF 120 YAGKAPRGIK TNWIMHEYRL ANVDRSAGKG HNLRLDDWVL CRIYNKKGIL EKYENVVAGE 180 IADDQKPKIT GFSPNEMLAP PQSEYLHWHT DSSSSSDQML SSPDKEVQSG SGWDDLDFQL 240 NNFMAAFPAG DPFNEHFNSF PDMLFPSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08790.1	1e-97	NAC family protein