PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019176870.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 100aa MW: 11747.6 Da PI: 9.822 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 42.3 | 1.9e-13 | 55 | 98 | 2 | 49 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaa 49 +++GV ++ rgrW+ eIrdp+ r kr +lg++++ eeAa+ +++a XP_019176870.1 55 KFRGVLKRP-RGRWAMEIRDPT----RgKRLWLGNYDSLEEAAAVYDNA 98 89****9**.8*********84....35*******************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 100 aa Download sequence |
MLWNRVLLIV VTDCDATDSS DDEGERAVRM WRRVKWHMWG IKFVSTLPFN ACCRKFRGVL 60 KRPRGRWAME IRDPTRGKRL WLGNYDSLEE AAAVYDNASV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11140.1 | 3e-19 | ERF family protein |