PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019176860.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | ARR-B | ||||||||
Protein Properties | Length: 509aa MW: 55762.7 Da PI: 6.7937 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 68.4 | 1.2e-21 | 226 | 275 | 4 | 54 |
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 +Wt eLHe+F++av+qL G + Pk+ilelm+v+gLt+ +v+SHLQk R XP_019176860.1 226 TEWTVELHEKFMNAVHQL-GDGRCYPKEILELMNVPGLTRMQVASHLQKCR 275 58****************.9*****************************98 PP | |||||||
2 | Myb_DNA-binding | 40 | 9.3e-13 | 227 | 274 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 WT e++e++ +av+qlG g +k I + m+ g+t+ q+ s++qk XP_019176860.1 227 EWTVELHEKFMNAVHQLGDGrcYPKEILELMNvPGLTRMQVASHLQKC 274 6*********************************************97 PP | |||||||
3 | Response_reg | 46.3 | 2.3e-16 | 30 | 137 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH..HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealell..kekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl++d + +++ +l+++ y +v+++d +++al l ke+++D ++ ++ p+m+G++ll++ + +l +i++ ++++ e+a++ ++ G XP_019176860.1 30 VLVSDHDLKFLASTVDMLKRHFY-KVTVVDCASAALSVLsqKEQKFDAVIANVNSPDMQGFKLLRQAVSM--DLIVILLCDEEDAEMAVRLIEHG 121 7888999999*************.***************655555******************9987775..5********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a l Kp+ +e l + XP_019176860.1 122 AFLLLQKPMCQETLKN 137 ********99888865 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 509 aa Download sequence |
MWRLPEYQID NPYANISMAS HHMVTNGIHV LVSDHDLKFL ASTVDMLKRH FYKVTVVDCA 60 SAALSVLSQK EQKFDAVIAN VNSPDMQGFK LLRQAVSMDL IVILLCDEED AEMAVRLIEH 120 GAFLLLQKPM CQETLKNLWQ HVVRERNVQR GKEMMLMEKN NRELAVINNG GGGADRGKGV 180 RVEENENYEM SYRGKGKRTR QQQSLNESTQ MMMNPGLARV KRKTCTEWTV ELHEKFMNAV 240 HQLGDGRCYP KEILELMNVP GLTRMQVASH LQKCRNDNWK APEERRAPPT SSVSPATESA 300 SRNEQRRFGT MPRLTAAVVA AAAAAAAGNS QTERQQLEST TLPEVQSSPS MDGAGRGDSS 360 QTLVHRQYLT IGYAATHVSK LDSSSPPSVV RPVAASASAA VAVTTFNATS GQASIVGSFN 420 YGSEGGLQGL SGGGGGSLFG NKDDFSADNP SNTTTGDDSY ATPPPPRLRS LQSDEFLTYN 480 DVDYEYLIQG FSDNNARQGG VGLQAPWLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G16857.2 | 3e-40 | ARR-B family protein |