PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019176549.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 282aa MW: 31021.3 Da PI: 9.8619 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 311.3 | 3.4e-95 | 1 | 282 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki...rernlalsekkaavaerd..........maflqrdkalaernkalverdnkll 82 mdddg + rn+gyyep+ k lglqlm s+ +rd+++ +n++++++++ +++r+ +++ rd ++++ ++k+l XP_019176549.1 1 MDDDGLNMRNWGYYEPS--HKGPLGLQLMPSMVDRDTRTffsGRENTSMMATNGLFHSREsvvsqaslthIDY-IRDGWINH--------RDKFL 84 9*****99*******99..7899***************9999555666************8887777776666.67777777........78999 PP GAGA_bind 83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177 ++ + +p g +v+ + + ++s+ q l+ ++++ e e+ +e +++ + + ++k++ ++ + ++kakk+kk ++++kk+ XP_019176549.1 85 HMFP-------GNPYGGGVMADPSGTQSSMQ----MLQTDSTK---E---EVGTVE--DPSVGKDSCPSKKRPGAAASSPKAKKPKKGPSAPKKN 160 9999.......45777777777666664433....23333333...1...222322..35556666666678888899999999***99999999 PP GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272 +++ +r+k kksid+v+ g+++D+s++P+PvC+CtG+++qCY+WG+GGWqSaCCtttiS+yPLP++ krrgaRiagrKmSqgafkk+LekL XP_019176549.1 161 DNPPA--QRAKPAKKSIDVVISGIDMDISSIPTPVCTCTGTPQQCYRWGCGGWQSACCTTTISMYPLPMNNKRRGARIAGRKMSQGAFKKVLEKL 253 99999..79************************************************************************************** PP GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301 a+eGy++s p+DL+++WAkHGtnkfvtir XP_019176549.1 254 ASEGYNFSDPIDLRTYWAKHGTNKFVTIR 282 ****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence |
MDDDGLNMRN WGYYEPSHKG PLGLQLMPSM VDRDTRTFFS GRENTSMMAT NGLFHSRESV 60 VSQASLTHID YIRDGWINHR DKFLHMFPGN PYGGGVMADP SGTQSSMQML QTDSTKEEVG 120 TVEDPSVGKD SCPSKKRPGA AASSPKAKKP KKGPSAPKKN DNPPAQRAKP AKKSIDVVIS 180 GIDMDISSIP TPVCTCTGTP QQCYRWGCGG WQSACCTTTI SMYPLPMNNK RRGARIAGRK 240 MSQGAFKKVL EKLASEGYNF SDPIDLRTYW AKHGTNKFVT IR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14685.1 | 2e-92 | BBR-BPC family protein |