PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019176548.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 286aa MW: 31343.6 Da PI: 10.0691 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 326 | 1.1e-99 | 1 | 286 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki...rernlalsekkaavaerd..........maflqrdkalaernkalverdnkll 82 mdddg + rn+gyyep+ k +lglqlms++ +rd+k+ n +++ ++ +++rd +++ rd ++++ ++k+l XP_019176548.1 1 MDDDGLNMRNWGYYEPT--HKGHLGLQLMSTVVDRDTKPflsGRDNPSMIVGNGIFHSRDsivsqvpithIDY-IRDGWINH--------RDKFL 84 9*****99*******99..899*****************9995556669***********9999999998888.89999998........78999 PP GAGA_bind 83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177 ++l+ +p g + + + + s+q+l+++q ++ + + ++ ++ + ++ ++ ++k+++a+ k kk kk + +skk+ XP_019176548.1 85 HMLP-------GNPYGGVMAEPSGTHSSMQMLQQQQ-----QQ--QPDSTKDASLSAEDPSLDKDGGPSKKRSAAA-APAKGKKSKKGPGASKKN 164 **99.......3455555555555555666633222.....22..1222344455666777777777775544444.344555566656677666 PP GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272 ++++ +r+k kksid+v+ gv++D+s++P+PvC+CtG+++qCY+WG+GGWqSaCCtttiS+yPLP++ krrgaRiagrKmSqgafkk+LekL XP_019176548.1 165 ENSPA--QRAKPAKKSIDVVISGVDMDISSIPTPVCTCTGTPQQCYRWGCGGWQSACCTTTISMYPLPMNNKRRGARIAGRKMSQGAFKKVLEKL 257 66666..79************************************************************************************** PP GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301 a+eGy+++np+DL++hWAkHGtnkfvtir XP_019176548.1 258 AGEGYNFANPIDLRTHWAKHGTNKFVTIR 286 ****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence |
MDDDGLNMRN WGYYEPTHKG HLGLQLMSTV VDRDTKPFLS GRDNPSMIVG NGIFHSRDSI 60 VSQVPITHID YIRDGWINHR DKFLHMLPGN PYGGVMAEPS GTHSSMQMLQ QQQQQQPDST 120 KDASLSAEDP SLDKDGGPSK KRSAAAAPAK GKKSKKGPGA SKKNENSPAQ RAKPAKKSID 180 VVISGVDMDI SSIPTPVCTC TGTPQQCYRW GCGGWQSACC TTTISMYPLP MNNKRRGARI 240 AGRKMSQGAF KKVLEKLAGE GYNFANPIDL RTHWAKHGTN KFVTIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14685.1 | 3e-96 | BBR-BPC family protein |