PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019176545.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family BBR-BPC
Protein Properties Length: 286aa    MW: 31343.6 Da    PI: 10.0691
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019176545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind3261.1e-9912861301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki...rernlalsekkaavaerd..........maflqrdkalaernkalverdnkll 82 
                     mdddg + rn+gyyep+   k +lglqlms++ +rd+k+      n +++  ++ +++rd          +++  rd ++++        ++k+l
  XP_019176545.1   1 MDDDGLNMRNWGYYEPT--HKGHLGLQLMSTVVDRDTKPflsGRDNPSMIVGNGIFHSRDsivsqvpithIDY-IRDGWINH--------RDKFL 84 
                     9*****99*******99..899*****************9995556669***********9999999998888.89999998........78999 PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     ++l+        +p g  + + + +  s+q+l+++q     ++  + + ++   ++ + ++ ++   ++k+++a+     k kk kk + +skk+
  XP_019176545.1  85 HMLP-------GNPYGGVMAEPSGTHSSMQMLQQQQ-----QQ--QPDSTKDASLSAEDPSLDKDGGPSKKRSAAA-APAKGKKSKKGPGASKKN 164
                     **99.......3455555555555555666633222.....22..1222344455666777777777775544444.344555566656677666 PP

       GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
                     ++++   +r+k  kksid+v+ gv++D+s++P+PvC+CtG+++qCY+WG+GGWqSaCCtttiS+yPLP++ krrgaRiagrKmSqgafkk+LekL
  XP_019176545.1 165 ENSPA--QRAKPAKKSIDVVISGVDMDISSIPTPVCTCTGTPQQCYRWGCGGWQSACCTTTISMYPLPMNNKRRGARIAGRKMSQGAFKKVLEKL 257
                     66666..79************************************************************************************** PP

       GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     a+eGy+++np+DL++hWAkHGtnkfvtir
  XP_019176545.1 258 AGEGYNFANPIDLRTHWAKHGTNKFVTIR 286
                     ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MDDDGLNMRN WGYYEPTHKG HLGLQLMSTV VDRDTKPFLS GRDNPSMIVG NGIFHSRDSI  60
VSQVPITHID YIRDGWINHR DKFLHMLPGN PYGGVMAEPS GTHSSMQMLQ QQQQQQPDST  120
KDASLSAEDP SLDKDGGPSK KRSAAAAPAK GKKSKKGPGA SKKNENSPAQ RAKPAKKSID  180
VVISGVDMDI SSIPTPVCTC TGTPQQCYRW GCGGWQSACC TTTISMYPLP MNNKRRGARI  240
AGRKMSQGAF KKVLEKLAGE GYNFANPIDL RTHWAKHGTN KFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.13e-96BBR-BPC family protein