PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019176251.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 318aa MW: 35224.5 Da PI: 6.772 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.5 | 6.6e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+d +k+ G g+W++ ++ g+ R++k+c++rw +yl XP_019176251.1 14 KGPWTPEEDEKLIDFIKKNGQGSWRSLPKLAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 47.4 | 4.6e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE++l ++++ lG++ W++Ia+ ++ gRt++++k+ w+++l XP_019176251.1 67 RGPFSSEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 318 aa Download sequence |
MGRTPCCDKK GLKKGPWTPE EDEKLIDFIK KNGQGSWRSL PKLAGLLRCG KSCRLRWTNY 60 LRPDIKRGPF SSEEEKLVIQ LHGILGNRWA AIASQLPGRT DNEIKNLWNT HLKKRLLSMG 120 IDPQTHEPSS ESIGPQRRLP TTPSARHMAQ WESARLEAEA RLSRESKLLV PSTIGGSEAD 180 FFLRIWNSEI GEAFRKFKKG VKFACQSPIS QASSSTKYGS ASGTTTEMDI TLAGSADAGG 240 NPNEDPEGKC NRSYTDDPLQ GSETSCSDEL EDSSESALQL LLDFPTYNDM SFLGHTDTYS 300 IYPAFLTEST LNCSSAEH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 1e-117 | MYB family protein |