PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019175936.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 335aa    MW: 38598.3 Da    PI: 5.8944
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019175936.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM175.81.2e-5471361128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eelv +yLk+k+++ k++l +vi+++d+y++ePwd++   k+   e++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+v
  XP_019175936.1   7 VPPGFRFHPTEEELVGYYLKRKINSLKIDL-DVITDIDLYRMEPWDIQDrcKLGYeEQSEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAV 100
                     69****************************.9***************952433332566************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++k+++ +g++ktLvfykgrap+g+ktdW+mheyrl
  XP_019175936.1 101 VNKEEQIIGMRKTLVFYKGRAPNGRKTDWIMHEYRL 136
                     **********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MEMECCVPPG FRFHPTEEEL VGYYLKRKIN SLKIDLDVIT DIDLYRMEPW DIQDRCKLGY  60
EEQSEWYFFS HKDRKYPTGT RTNRATAAGF WKATGRDKAV VNKEEQIIGM RKTLVFYKGR  120
APNGRKTDWI MHEYRLQTSE HGPPQEEGWV VCRAFKKPIP NTKPYNDGWN YKYSYRPPSI  180
SDDISSTNPL LLHGINTFNN NQAITNRHQF PNFQLPPHHH QDGLILPPAA AGNGDNHLVE  240
LPQLDSPTMS TSFATKDGTF VANEDGEVEK QLENYGDEFQ NWKNIVEDRF LEVPLSATTD  300
PLLPASSFPN VNMPLIISDD SQHHISHLLQ CFPDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.14e-98NAC family protein