PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019175874.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 595aa MW: 66405.4 Da PI: 6.947

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019175874.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26	1.5e-08	518	556	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + XP_019175874.1 518 MFQNflHPYPKDTEKHLLAVKSGLTRSQVSNWFINARVR 556 5887779******************************88 PP
2	BELL	75.6	7.4e-25	385	455	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgs.akpYtslAlkaiSrhFrcLkdaiaeqi 72 + + k+ +Ll ll+ Vd+rY+q+ ++l++v+s+F+av++l + ++t++Al+++S+ +++L+++i+ i XP_019175874.1 385 VDAETKRKHLLALLQAVDDRYSQCLDELHMVVSAFHAVTELHHpTSIHTHFALQTVSFLYKNLRERISTSI 455 67899*********************************9862679******************9765 PP

Sequence ? help Back to Top
Protein Sequence Length: 595 aa Download sequence
MTRKDMVVSR PIDMADHSSI VADEYLLPPT NFVSIGCPDW INLSNQNENQ NENQIMDGHG 60 ISLPSVLQGE AMNSFMSVAN FSQPVNCETV KDLSVASLYP INGAPQIQND FRERTPLSAV 120 SLAYLLAARN GAYENPEKFE ASATLPYSTQ VTRGLGSNSY SDIFNPSCGS LANHEFSVLP 180 VDMSRKCDFD KPEIMGTVMG RTTGSQPFPL PGNINPGVWF SAERASSSSS SPSGSSRFSN 240 ELSLSLTTTP PQVACGTSIQ DQFSELSCSG VTSNPFRERP FGGLEQAPAC TGNKNLSLNF 300 DSYKPVQLSQ FLSGSRYLAV MQEILSQIAK YSLENLNSIS YPTNLTDDGE HSPFSLSCSA 360 GTGRGVAVLG SDPFPYGAHR TVNRVDAETK RKHLLALLQA VDDRYSQCLD ELHMVVSAFH 420 AVTELHHPTS IHTHFALQTV SFLYKNLRER ISTSILAMGE QYSSSSSSTR SAREEKSFEA 480 SFIQKQWTLQ QLRKKDHQLW RPQRGLPERS VSVLRAWMFQ NFLHPYPKDT EKHLLAVKSG 540 LTRSQVSNWF INARVRLWKP MIEEMYAEMN RRNHQQHHNH HPNEEEMNGC RNQRC

Sequence ? help Back to Top

Protein Sequence Length: 595 aa Download sequence

MTRKDMVVSR PIDMADHSSI VADEYLLPPT NFVSIGCPDW INLSNQNENQ NENQIMDGHG  60
ISLPSVLQGE AMNSFMSVAN FSQPVNCETV KDLSVASLYP INGAPQIQND FRERTPLSAV  120
SLAYLLAARN GAYENPEKFE ASATLPYSTQ VTRGLGSNSY SDIFNPSCGS LANHEFSVLP  180
VDMSRKCDFD KPEIMGTVMG RTTGSQPFPL PGNINPGVWF SAERASSSSS SPSGSSRFSN  240
ELSLSLTTTP PQVACGTSIQ DQFSELSCSG VTSNPFRERP FGGLEQAPAC TGNKNLSLNF  300
DSYKPVQLSQ FLSGSRYLAV MQEILSQIAK YSLENLNSIS YPTNLTDDGE HSPFSLSCSA  360
GTGRGVAVLG SDPFPYGAHR TVNRVDAETK RKHLLALLQA VDDRYSQCLD ELHMVVSAFH  420
AVTELHHPTS IHTHFALQTV SFLYKNLRER ISTSILAMGE QYSSSSSSTR SAREEKSFEA  480
SFIQKQWTLQ QLRKKDHQLW RPQRGLPERS VSVLRAWMFQ NFLHPYPKDT EKHLLAVKSG  540
LTRSQVSNWF INARVRLWKP MIEEMYAEMN RRNHQQHHNH HPNEEEMNGC RNQRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	8e-90	TALE family protein